BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033G01SP1|AL429788
(844 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1658 1585 0.0
>3x_Contig1658
Length = 13395
Score = 1585 bits (794), Expect = 0.0
Identities = 831/844 (98%), Gaps = 4/844 (0%)
Strand = Plus / Minus
Query: 1 gtcgtttaatatagattcggcaagtgtggtattctctctgaaggtctgtagctctccact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5878 gtcgtttaatatagattcggcaagtgtggtattctctctgaaggtctgtagctctccact 5819
Query: 61 caattttttcgatgtctcaccaagattttycttctgasccatgtctgtyagtagcttttt 120
||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||
Sbjct: 5818 caattttttcgatgtctcaccaagatttttcttctgagccatgtctgttagtagcttttt 5759
Query: 121 acgccttaaaagttcccaagaacattgaagacacttaacggacaggtagtcatcgtaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5758 acgccttaaaagttcccaagaacattgaagacacttaacggacaggtagtcatcgtaaag 5699
Query: 181 cgtcttcttggtagtatcgtcaacgatatttgattcaaattctggtgttgatgggttcga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5698 cgtcttcttggtagtatcgtcaacgatatttgattcaaattctggtgttgatgggttcga 5639
Query: 241 cgtcatgttggaattcgtagcttgagctggcaatggcataagaacygggtgcagagttac 300
|||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 5638 cgtcatgttggaattcgtag-ttgagctggcaatggcataagaactgggtgcagagttac 5580
Query: 301 tgttcgatgctggtgcgagtttgtattggcgattaggttcatattggaatatgaactcag 360
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5579 tgttcgatg-tggtg-gagtttgtattggcgattaggttcatattggaatatgaactcag 5522
Query: 361 tcttgaacgttcgtctcgtttttgttctgttgtttccgctggaggctccggtgcctcctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5521 tcttgaacgttcgtctcgtttttgttctgttgtttccgctggaggctccggtgcctcctc 5462
Query: 421 atgtytctytatgggatcaatatgcacatctatsatggcggatttaccagtagcatagtc 480
|||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 5461 atgtttctttatgggatcaatatgcacatctatgatggcggatttaccagtagcatagtc 5402
Query: 481 gcgtaggagtctggtatacsatcttcggtacgacaatcttcgaatctgtaaacccagtat 540
| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 5401 g-gtaggagtctggtatacgatcttcggtacgacaatcttcgaatctgtaaacccagtat 5343
Query: 541 tttctaatggttcccgtttcctagtcgatgctctagacaatcgagataagattgahctgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 5342 tttctaatggttcccgtttcctagtcgatgctctagacaatcgagataagattgatctgg 5283
Query: 601 aattcctattatctctataatcagattttgatacggttcctgacgttcttgacagtcgat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5282 aattcctattatctctataatcagattttgatacggttcctgacgttcttgacagtcgat 5223
Query: 661 cgaatcttccccttcgtactgaaccttcaaaagatgaggtatccaaagaggaatctgagc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5222 cgaatcttccccttcgtactgaaccttcaaaagatgaggtatccaaagaggaatctgagc 5163
Query: 721 tggctacagagttcttagaatcatgaaccatcctcgcatgttttttactaaaccataacg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5162 tggctacagagttcttagaatcatgaaccatcctcgcatgttttttactaaaccataacg 5103
Query: 781 tcccatctggtttcttcaactcgtcccaatggttggttctccagattatatcattagatt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5102 tcccatctggtttcttcaactcgtcccaatggttggttctccagattatatcattagatt 5043
Query: 841 tctc 844
||||
Sbjct: 5042 tctc 5039
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4857
Number of Sequences: 1807
Number of extensions: 4857
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 844
length of database: 10,358,551
effective HSP length: 16
effective length of query: 828
effective length of database: 10,329,639
effective search space: 8552941092
effective search space used: 8552941092
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)